STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02821CTD small phosphatase-like. (275 aa)    
Predicted Functional Partners:
N307_14502
Protein phosphatase 1 regulatory subunit 7.
 
      0.897
N307_09476
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.873
N307_11346
DNA-directed RNA polymerases I and III subunit RPAC1.
    
 0.858
N307_13954
Mitochondrial import inner membrane translocase subunit Tim21.
    
 0.824
N307_03022
General transcription factor IIF subunit 2.
    
 0.816
N307_02779
DNA-directed RNA polymerase II subunit RPB11-a.
    
 0.786
N307_07047
Phosphatidate phosphatase LPIN3.
    
 0.785
N307_04028
Phosphatidate phosphatase LPIN1.
    
 0.785
N307_08164
DNA-directed RNA polymerase II subunit RPB4.
    
 0.779
N307_06300
Ribosome-binding protein 1.
    
 0.751
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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