STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08009Myogenic factor. (217 aa)    
Predicted Functional Partners:
N307_11939
Transcription factor E2-alpha.
    
 0.891
N307_15322
TATA box-binding protein-like 1.
    
 0.762
N307_12172
Myocyte-specific enhancer factor 2C.
    
 0.694
N307_07513
Myocyte-specific enhancer factor 2A.
    
 0.658
N307_13277
CREB-binding protein.
    
 
 0.637
N307_04271
TATA-box-binding protein.
    
 0.617
N307_08499
TATA box-binding protein-like 2.
    
 0.617
N307_08010
Myogenic factor 6.
  
 
0.608
N307_05746
Myocyte-specific enhancer factor 2B.
    
 0.581
N307_02545
Paired box protein Pax-3.
   
 
 0.565
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.