STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07833Nischarin. (96 aa)    
Predicted Functional Partners:
N307_07832
Nischarin.
 
      0.900
N307_15037
Rho-related GTP-binding protein RhoN.
    
  0.568
N307_15437
Rho-related GTP-binding protein RhoE.
    
  0.568
N307_03221
Phospholipase.
     
 0.508
N307_04872
Ras-related protein Rab-14.
   
 0.498
N307_05964
Ras-related C3 botulinum toxin substrate 1.
    
 0.473
N307_13081
Ras-related C3 botulinum toxin substrate 3.
    
 0.473
N307_05139
Ras-related C3 botulinum toxin substrate 2.
    
 0.473
N307_00100
Rho-related GTP-binding protein RhoC.
    
  0.462
N307_04002
Rho-related GTP-binding protein RhoB.
    
  0.462
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.