Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N307_01448 | N307_02835 | A0A093GYU3 | A0A093ILY9 | TAR DNA-binding protein 43. | Heterogeneous nuclear ribonucleoprotein K. | 0.847 |
N307_01448 | N307_03566 | A0A093GYU3 | A0A093FWZ1 | TAR DNA-binding protein 43. | Mediator of RNA polymerase II transcription subunit 26. | 0.440 |
N307_01448 | N307_05360 | A0A093GYU3 | A0A093GLR9 | TAR DNA-binding protein 43. | RNA-binding motif protein, X chromosome. | 0.493 |
N307_01448 | N307_05688 | A0A093GYU3 | A0A093GIF2 | TAR DNA-binding protein 43. | Transformer-2 protein beta. | 0.632 |
N307_01448 | N307_07460 | A0A093GYU3 | A0A093GBU9 | TAR DNA-binding protein 43. | Heterogeneous nuclear ribonucleoprotein U. | 0.627 |
N307_01448 | N307_08347 | A0A093GYU3 | A0A093I4E2 | TAR DNA-binding protein 43. | Cold-inducible RNA-binding protein. | 0.467 |
N307_01448 | N307_09416 | A0A093GYU3 | A0A093GPN2 | TAR DNA-binding protein 43. | Serine/arginine-rich splicing factor 3. | 0.837 |
N307_01448 | N307_09445 | A0A093GYU3 | A0A093J923 | TAR DNA-binding protein 43. | Heterogeneous nuclear ribonucleoproteins A2/B1. | 0.892 |
N307_01448 | N307_14645 | A0A093GYU3 | A0A093H7P6 | TAR DNA-binding protein 43. | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | 0.580 |
N307_02835 | N307_01448 | A0A093ILY9 | A0A093GYU3 | Heterogeneous nuclear ribonucleoprotein K. | TAR DNA-binding protein 43. | 0.847 |
N307_02835 | N307_03566 | A0A093ILY9 | A0A093FWZ1 | Heterogeneous nuclear ribonucleoprotein K. | Mediator of RNA polymerase II transcription subunit 26. | 0.781 |
N307_02835 | N307_05066 | A0A093ILY9 | A0A093GI16 | Heterogeneous nuclear ribonucleoprotein K. | Desumoylating isopeptidase 1. | 0.889 |
N307_02835 | N307_05360 | A0A093ILY9 | A0A093GLR9 | Heterogeneous nuclear ribonucleoprotein K. | RNA-binding motif protein, X chromosome. | 0.903 |
N307_02835 | N307_05688 | A0A093ILY9 | A0A093GIF2 | Heterogeneous nuclear ribonucleoprotein K. | Transformer-2 protein beta. | 0.813 |
N307_02835 | N307_07460 | A0A093ILY9 | A0A093GBU9 | Heterogeneous nuclear ribonucleoprotein K. | Heterogeneous nuclear ribonucleoprotein U. | 0.897 |
N307_02835 | N307_08347 | A0A093ILY9 | A0A093I4E2 | Heterogeneous nuclear ribonucleoprotein K. | Cold-inducible RNA-binding protein. | 0.856 |
N307_02835 | N307_09416 | A0A093ILY9 | A0A093GPN2 | Heterogeneous nuclear ribonucleoprotein K. | Serine/arginine-rich splicing factor 3. | 0.876 |
N307_02835 | N307_09445 | A0A093ILY9 | A0A093J923 | Heterogeneous nuclear ribonucleoprotein K. | Heterogeneous nuclear ribonucleoproteins A2/B1. | 0.980 |
N307_02835 | N307_14645 | A0A093ILY9 | A0A093H7P6 | Heterogeneous nuclear ribonucleoprotein K. | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | 0.781 |
N307_03566 | N307_01448 | A0A093FWZ1 | A0A093GYU3 | Mediator of RNA polymerase II transcription subunit 26. | TAR DNA-binding protein 43. | 0.440 |
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