STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10444Protein canopy 3. (115 aa)    
Predicted Functional Partners:
N307_13921
Endoplasmin.
    
 0.800
N307_11691
Leucine-rich repeat-containing protein 40.
    
 0.764
N307_01657
Toll-like receptor 7; Belongs to the Toll-like receptor family.
    
 0.695
N307_06774
Toll-like receptor 3; Belongs to the Toll-like receptor family.
    
 0.674
N307_03868
Heat shock protein HSP 90-alpha.
    
 0.651
N307_13278
Uncharacterized protein.
    
 0.651
N307_12582
Toll-like receptor 4; Belongs to the Toll-like receptor family.
    
 0.646
N307_10417
Toll-like receptor 5; Belongs to the Toll-like receptor family.
    
 0.637
N307_04291
Protein unc-93 A.
   
 
 0.622
N307_03805
Toll-like receptor 2 type-2; Belongs to the Toll-like receptor family.
    
 0.551
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.