STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10510Serine palmitoyltransferase 1. (419 aa)    
Predicted Functional Partners:
N307_11539
Serine palmitoyltransferase 2.
  
0.977
N307_05884
Serine palmitoyltransferase 3.
  
0.977
N307_05885
Isthmin-1.
 
 
 0.952
N307_11540
Isthmin-2.
 
 
 0.952
N307_10227
Serine palmitoyltransferase small subunit A.
    
 0.939
N307_06908
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.929
N307_05630
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.929
N307_09676
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.925
N307_01826
Bifunctional glutamate/proline--tRNA ligase.
   
 0.914
N307_01442
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.914
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.