STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02857P53 and DNA damage-regulated protein 1. (105 aa)    
Predicted Functional Partners:
N307_14972
Prefoldin subunit 2.
    
 0.905
N307_14298
RNA polymerase II-associated protein 3.
    
 
 0.838
N307_09878
Prefoldin subunit 4.
    
 0.810
N307_03108
PIH1 domain-containing protein 2.
    
 
 0.763
N307_12945
Unconventional prefoldin RPB5 interactor.
    
 
 0.762
N307_10366
WD repeat-containing protein 92.
    
 
 0.673
N307_08353
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 
 0.653
N307_02069
Prefoldin subunit 1.
    
 0.582
N307_14358
Prefoldin subunit 3.
    
 0.572
N307_11889
ARL14 effector protein.
      
 0.514
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.