STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05495Cellular nucleic acid-binding protein. (170 aa)    
Predicted Functional Partners:
N307_02320
Heterogeneous nuclear ribonucleoprotein K.
   
  
 0.746
N307_02835
Heterogeneous nuclear ribonucleoprotein K.
   
  
 0.746
N307_08283
Superkiller viralicidic activity 2-like 2.
   
 
 0.707
N307_12466
PAP-associated domain-containing protein 5.
   
 
 0.677
N307_07741
Putative ribosomal RNA methyltransferase 2.
   
 
 0.612
N307_08291
Eukaryotic translation initiation factor 4H.
   
 
 0.564
N307_13502
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.526
N307_09445
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 
 0.517
N307_08789
Suppressor of fused.
      
 0.507
N307_06442
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.501
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.