STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09653Cyclin-A1; Belongs to the cyclin family. (317 aa)    
Predicted Functional Partners:
N307_13137
Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily.
 
 
 0.992
N307_00458
Cyclin-dependent kinase 1.
 
 
 0.982
N307_04727
Cell division cycle protein 20.
   
 0.979
N307_11235
Retinoblastoma-associated protein.
   
 0.971
N307_12432
Transcription factor E2F1.
   
 0.970
N307_03648
DNA replication factor Cdt1.
   
 0.961
N307_12944
G1/S-specific cyclin-E1; Belongs to the cyclin family.
  
0.961
N307_09764
S-phase kinase-associated protein 2.
   
 0.959
N307_08883
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
   
 0.951
N307_03077
Cyclin-dependent kinase inhibitor 1B.
    
 0.950
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.