STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05248Cytochrome P450 2J6; Belongs to the cytochrome P450 family. (488 aa)    
Predicted Functional Partners:
N307_04516
N-acetylserotonin O-methyltransferase-like.
     
 0.862
N307_13632
Bifunctional epoxide hydrolase 2.
   
 0.856
N307_03043
Cytochrome b5 reductase 4.
   
 0.753
N307_07899
Phospholipase A2.
    
 0.749
N307_05488
BRCA1-associated RING domain protein 1.
    
 0.664
N307_01916
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
 
 0.662
N307_11049
Nibrin.
    
 0.658
N307_01901
25-hydroxycholesterol 7-alpha-hydroxylase.
  
  
 0.650
N307_02969
24-hydroxycholesterol 7-alpha-hydroxylase.
  
 
 0.647
N307_01572
Partner and localizer of BRCA2.
  
 0.646
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.