STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02681C-myc promoter-binding protein. (1878 aa)    
Predicted Functional Partners:
N307_11139
Ras-related protein Rab-8B.
    
 0.580
N307_08396
Ras-related protein Rab-8A.
    
 0.580
N307_09992
GRB2-associated and regulator of MAPK protein.
    
 0.550
N307_05791
Ras-related protein Rab-10.
    
 0.550
N307_09993
Ras-related protein Rab-10.
    
 0.550
N307_13694
F-box/LRR-repeat protein 4.
   
  
 0.526
N307_12757
Sphingosine-1-phosphate phosphatase 1.
      
 0.513
N307_09423
Phosphotriesterase-related protein.
    
 0.470
N307_04892
DENN domain-containing protein 1A.
   
 
0.448
N307_08648
Ras-related protein Rab-28.
    
 0.437
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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