STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10015Nucleophosmin. (281 aa)    
Predicted Functional Partners:
N307_00197
60S ribosomal protein L5.
   
 
 0.927
N307_13168
Small ubiquitin-related modifier.
   
 0.800
N307_04073
Hepatocyte growth factor receptor.
   
 0.796
N307_07755
Nucleolar protein 58.
   
  
 0.795
N307_10699
Caspase-2; Belongs to the peptidase C14A family.
   
 
 0.766
N307_08768
Nucleoplasmin-3.
   
 
0.743
N307_10385
E3 ubiquitin-protein ligase Mdm2.
   
 
 0.742
N307_13607
Histone-binding protein RBBP7.
   
 0.735
N307_14663
Histone-binding protein RBBP4.
   
 0.735
N307_05064
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.711
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.