STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05558Trafficking protein particle complex subunit 10. (223 aa)    
Predicted Functional Partners:
N307_14609
Trafficking protein particle complex subunit 3.
    
 0.982
N307_03645
Trafficking protein particle complex subunit 2-like.
    
 0.977
N307_01662
Trafficking protein particle complex subunit 2.
    
 0.975
N307_12561
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.974
N307_05557
Trafficking protein particle complex subunit 10.
 
  
  0.967
N307_09006
Trafficking protein particle complex subunit 6B.
    
 0.967
N307_07284
Trafficking protein particle complex subunit 9.
   
 0.961
N307_05559
Trafficking protein particle complex subunit 10.
 
   
  0.933
N307_09988
Trafficking protein particle complex subunit 8.
    
 0.888
N307_12038
Lebercilin.
    
 0.884
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.