STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12696Ras-related protein Rab-23. (236 aa)    
Predicted Functional Partners:
N307_08791
ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.655
N307_06904
Rab proteins geranylgeranyltransferase component A 1.
   
 
 0.631
N307_09279
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 
 0.545
N307_13777
ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.533
N307_06856
Rab-like 5.
      
 0.518
N307_01911
Ras-related protein Rab-2A.
  
 
0.516
N307_08789
Suppressor of fused.
      
 0.514
N307_04872
Ras-related protein Rab-14.
  
 
0.514
N307_00793
Uncharacterized protein.
      
 0.512
N307_14346
ADP-ribosylation factor-like 13B.
      
 0.505
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.