STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12811Histone chaperone ASF1. (207 aa)    
Predicted Functional Partners:
N307_14110
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.999
N307_03707
Chromatin assembly factor 1 subunit B.
   
 
 0.993
N307_04770
Nuclear autoantigenic sperm protein.
   
 
 0.981
N307_01175
DNA helicase; Belongs to the MCM family.
   
 
 0.975
N307_05419
Serine/threonine-protein kinase tousled-like 2.
    
 
 0.957
N307_07568
Histone acetyltransferase type B catalytic subunit.
   
 
 0.948
N307_12105
Serine/threonine-protein kinase Chk2.
   
 
 0.946
N307_05064
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.909
N307_07562
Serine/threonine-protein kinase tousled-like 1.
    
 
 0.892
N307_10832
U3 small nucleolar RNA-associated protein 15.
   
    0.874
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.