STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15214Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
N307_05488
BRCA1-associated RING domain protein 1.
    
 0.719
N307_12153
V(D)J recombination-activating protein 2.
   
 0.658
N307_02992
Intersectin-2.
    
  0.603
N307_02227
Ubiquitin-40S ribosomal protein S27a.
    
  0.589
N307_02337
60S ribosomal protein L21.
   
   0.583
N307_07899
Phospholipase A2.
    
 0.570
N307_03314
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.550
N307_09821
Histone H2A deubiquitinase MYSM1.
    
 0.547
N307_08210
Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.
    
  0.532
N307_04334
26S proteasome non-ATPase regulatory subunit 14.
    
  0.530
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.