STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01220Puratrophin-1. (119 aa)    
Predicted Functional Partners:
N307_01221
Rho guanine nucleotide exchange factor 40.
 
   
  0.927
N307_07517
Tyrosine-protein kinase receptor.
    
  0.859
N307_07899
Phospholipase A2.
   
 
 0.846
N307_09853
Guanine nucleotide-binding protein G(S) subunit alpha.
   
 
 0.845
N307_12428
Relaxin receptor 1.
   
 
  0.839
N307_11882
Leucine-rich repeat-containing G-protein coupled receptor 4.
   
 
  0.839
N307_12536
Relaxin receptor 1.
   
 
  0.839
N307_00366
Leucine-rich repeat-containing G-protein coupled receptor 5.
   
 
  0.839
N307_14489
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.822
N307_08382
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.822
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.