STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05842Zinc finger protein 3. (169 aa)    
Predicted Functional Partners:
N307_01084
Adenylate kinase 9; Belongs to the adenylate kinase family.
    
  0.839
N307_01083
Adenylate kinase 9.
 
  
  0.839
N307_01541
Speckle-type POZ protein-like.
   
  0.552
N307_02051
Lysine-specific demethylase 6A.
    
 0.544
N307_06041
Ribosomal_S10 domain-containing protein.
   
  0.538
N307_13516
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
  0.537
N307_08789
Suppressor of fused.
   
 0.537
N307_06066
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1.
   
  0.535
N307_09533
Uncharacterized protein.
   
  0.532
N307_00537
Ragulator complex protein LAMTOR2.
    
  0.531
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.