STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14853Sodium-coupled neutral amino acid transporter 3. (88 aa)    
Predicted Functional Partners:
N307_05710
Transient receptor potential cation channel subfamily M member 2.
     
 0.781
N307_05606
Ras-related GTP-binding protein A.
   
 0.715
N307_00537
Ragulator complex protein LAMTOR2.
    
 0.714
N307_02420
Ragulator complex protein LAMTOR1.
    
 0.696
N307_11988
Ragulator complex protein LAMTOR5.
    
 0.689
N307_02080
c-Myc-binding protein.
    
 0.596
N307_06320
Ras-related GTP-binding protein D.
    
 0.596
N307_02079
Ras-related GTP-binding protein C.
    
 0.596
N307_04637
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.559
N307_01567
V-type proton ATPase subunit d 1.
    
 0.559
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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