STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01535Kynureninase. (467 aa)    
Predicted Functional Partners:
N307_12002
Kynurenine 3-monooxygenase.
 
 0.994
TDO2
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
 
 
 0.990
N307_11680
3-hydroxyanthranilate 3,4-dioxygenase.
  
 
 0.966
N307_13059
Kynurenine formamidase.
 
 
 0.952
N307_07608
Indoleamine 2,3-dioxygenase 2.
   
 0.940
N307_08639
Kynurenine--oxoglutarate transaminase 3.
   
 
 0.923
N307_11175
Squalene monooxygenase.
  
 
 0.867
N307_11592
Ubiquinone biosynthesis monooxygenase COQ6.
  
 
 0.867
N307_13535
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
 
 0.850
N307_15294
Uncharacterized protein.
   
 0.845
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.