STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01582Ubiquitin carboxyl-terminal hydrolase 31. (1144 aa)    
Predicted Functional Partners:
N307_07331
Polyubiquitin-B.
    
 0.777
N307_09155
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.745
N307_14977
Uncharacterized protein.
   
 
 0.721
N307_00618
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.720
N307_07646
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.715
N307_13794
60S ribosomal protein L26.
    
 
 0.714
N307_02932
Uncharacterized protein.
    
 
 0.714
N307_03683
Ubiquitin carboxyl-terminal hydrolase 10.
    
0.710
N307_02227
Ubiquitin-40S ribosomal protein S27a.
    
 0.699
N307_07868
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.697
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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