STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08752Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (361 aa)    
Predicted Functional Partners:
N307_07858
Spindle and kinetochore-associated protein 1.
   
 
 0.595
N307_07297
Spindle and kinetochore-associated protein 2.
   
 
 0.589
N307_13936
Cytoskeleton-associated protein 4.
     
 0.586
N307_12848
Uncharacterized protein.
    
 
 0.545
N307_10980
Replication protein A 14 kDa subunit.
   
   0.539
N307_02676
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
    
 
 0.534
N307_12378
E3 ubiquitin-protein ligase RFWD3.
    
   0.532
N307_04663
Ribulose-phosphate 3-epimerase.
 
      0.440
N307_05507
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.426
N307_03161
DNA annealing helicase and endonuclease ZRANB3.
    
 
 0.425
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.