Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N307_01263 | N307_01279 | A0A093G758 | A0A093G6G0 | Apoptosis-inducing factor 2. | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.615 |
N307_01263 | N307_03043 | A0A093G758 | A0A093H2F2 | Apoptosis-inducing factor 2. | Cytochrome b5 reductase 4. | 0.926 |
N307_01263 | N307_08253 | A0A093G758 | A0A093J7R0 | Apoptosis-inducing factor 2. | L-gulonolactone oxidase. | 0.786 |
N307_01263 | N307_09213 | A0A093G758 | A0A093G9U3 | Apoptosis-inducing factor 2. | 4Fe-4S ferredoxin-type domain-containing protein. | 0.429 |
N307_01263 | N307_13632 | A0A093G758 | A0A093GX29 | Apoptosis-inducing factor 2. | Bifunctional epoxide hydrolase 2. | 0.478 |
N307_01279 | N307_01263 | A0A093G6G0 | A0A093G758 | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Apoptosis-inducing factor 2. | 0.615 |
N307_01279 | N307_05866 | A0A093G6G0 | A0A093GQ16 | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Hydroxyacid oxidase 1. | 0.705 |
N307_01279 | N307_08247 | A0A093G6G0 | A0A093GXE8 | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Uncharacterized protein. | 0.705 |
N307_01279 | N307_08253 | A0A093G6G0 | A0A093J7R0 | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | L-gulonolactone oxidase. | 0.813 |
N307_01279 | N307_09213 | A0A093G6G0 | A0A093G9U3 | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 4Fe-4S ferredoxin-type domain-containing protein. | 0.993 |
N307_01279 | N307_11163 | A0A093G6G0 | A0A093FWA4 | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | ETF domain-containing protein. | 0.829 |
N307_03043 | N307_01263 | A0A093H2F2 | A0A093G758 | Cytochrome b5 reductase 4. | Apoptosis-inducing factor 2. | 0.926 |
N307_03043 | N307_05866 | A0A093H2F2 | A0A093GQ16 | Cytochrome b5 reductase 4. | Hydroxyacid oxidase 1. | 0.487 |
N307_03043 | N307_08247 | A0A093H2F2 | A0A093GXE8 | Cytochrome b5 reductase 4. | Uncharacterized protein. | 0.487 |
N307_03043 | N307_08253 | A0A093H2F2 | A0A093J7R0 | Cytochrome b5 reductase 4. | L-gulonolactone oxidase. | 0.876 |
N307_03043 | N307_09213 | A0A093H2F2 | A0A093G9U3 | Cytochrome b5 reductase 4. | 4Fe-4S ferredoxin-type domain-containing protein. | 0.764 |
N307_03043 | N307_13632 | A0A093H2F2 | A0A093GX29 | Cytochrome b5 reductase 4. | Bifunctional epoxide hydrolase 2. | 0.789 |
N307_04503 | N307_08253 | A0A093GQ77 | A0A093J7R0 | Regucalcin. | L-gulonolactone oxidase. | 0.814 |
N307_04504 | N307_08253 | A0A093GFD6 | A0A093J7R0 | Regucalcin. | L-gulonolactone oxidase. | 0.814 |
N307_05866 | N307_01279 | A0A093GQ16 | A0A093G6G0 | Hydroxyacid oxidase 1. | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.705 |
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