STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08253L-gulonolactone oxidase. (443 aa)    
Predicted Functional Partners:
N307_13632
Bifunctional epoxide hydrolase 2.
   
 0.960
N307_03043
Cytochrome b5 reductase 4.
  
 0.876
N307_04504
Regucalcin.
  
 
 0.814
N307_04503
Regucalcin.
  
 
 0.814
N307_01279
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.813
N307_09213
4Fe-4S ferredoxin-type domain-containing protein.
   
 0.801
N307_11163
ETF domain-containing protein.
  
 
 0.793
N307_05866
Hydroxyacid oxidase 1.
  
 0.787
N307_01263
Apoptosis-inducing factor 2.
    
 0.786
N307_08247
Uncharacterized protein.
  
 0.781
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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