STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14583Four and a half LIM domains protein 3. (279 aa)    
Predicted Functional Partners:
N307_09181
Vang-like protein.
    
 0.782
N307_06672
Krueppel-like factor 3.
    
 
 0.717
N307_05257
Segment polarity protein dishevelled DVL-3.
    
 0.707
N307_01498
Segment polarity protein dishevelled DVL-1.
    
 0.707
N307_10962
TNF receptor-associated factor 2.
    
 0.581
N307_04869
TNF receptor-associated factor 2.
    
 0.581
N307_04597
Alpha-actinin-2.
    
 0.539
N307_06907
26S proteasome non-ATPase regulatory subunit 3.
    
  0.532
N307_04290
Afadin.
    
 0.525
N307_01165
GATA-binding factor 2.
    
 0.507
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.