STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10883DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (849 aa)    
Predicted Functional Partners:
N307_12294
MutS protein 5.
  
0.998
N307_05631
PMS1 protein 1.
 
 0.967
N307_05970
Mismatch repair endonuclease PMS2.
 
 0.965
N307_13895
DNA mismatch repair protein Mlh1.
 
 0.964
N307_11572
DNA mismatch repair protein Mlh3.
  
 0.957
N307_13234
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.886
N307_03525
Exonuclease 1.
  
 0.885
N307_04120
Fanconi anemia group M protein.
    
 
 0.862
N307_08909
DNA mismatch repair protein Msh3.
 
    
 0.855
N307_09613
Uncharacterized protein.
  
 0.845
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.