STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11592Ubiquinone biosynthesis monooxygenase COQ6. (471 aa)    
Predicted Functional Partners:
N307_13692
Uncharacterized protein.
 
 
 0.980
N307_12104
Uncharacterized protein.
   
 0.945
N307_03043
Cytochrome b5 reductase 4.
  
 0.914
N307_01535
Kynureninase.
  
 
 0.867
N307_04536
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
   
 
 0.858
N307_02067
Peroxisomal NADH pyrophosphatase NUDT12.
    
 0.847
N307_05926
Ubiquinone biosynthesis protein COQ7.
 
 
 0.837
N307_07899
Phospholipase A2.
   
 
 0.828
N307_02435
Uncharacterized protein.
 
 
 
 0.808
N307_01840
ABC1 domain-containing protein.
  
 
 0.790
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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