STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00914Protein phosphatase; Belongs to the PP2C family. (288 aa)    
Predicted Functional Partners:
N307_02691
Uncharacterized protein.
  
   0.611
N307_07967
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3.
   
 0.571
N307_07635
E3 ubiquitin-protein ligase TRAF7.
   
 0.553
N307_09968
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.552
N307_12035
Transket_pyr domain-containing protein.
   
 0.552
N307_14428
PPM-type phosphatase domain-containing protein.
    
 
 0.549
N307_00306
PPM-type phosphatase domain-containing protein.
    
 
 0.549
N307_01400
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
 0.549
N307_08597
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2.
   
 0.546
N307_12065
SEC14-like 2.
   
   0.538
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.