STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1O1_08674RRM domain-containing protein. (262 aa)    
Predicted Functional Partners:
A1O1_07126
RanBD1 domain-containing protein.
   
 0.989
A1O1_05167
TAP-C domain-containing protein.
    
 0.964
A1O1_06774
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
   
 0.961
A1O1_07432
ATP-dependent RNA helicase sub2.
   
 0.961
A1O1_04852
Uncharacterized protein.
   
 0.943
A1O1_01315
Uncharacterized protein.
   
 0.926
A1O1_01284
Uncharacterized protein.
    
 0.923
A1O1_03873
Nuclear cap-binding protein subunit 2.
   
 0.913
A1O1_08192
Protein mago nashi.
   
 0.907
A1O1_02782
RRM domain-containing protein.
    
 0.903
Your Current Organism:
Capronia coronata
NCBI taxonomy Id: 1182541
Other names: C. coronata CBS 617.96, Capronia coronata CBS 617.96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.