STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1O1_06129Btz domain-containing protein. (680 aa)    
Predicted Functional Partners:
A1O1_03347
ANK_REP_REGION domain-containing protein.
   
 0.620
A1O1_08497
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
  
 
  0.517
A1O1_05662
Calponin-homology (CH) domain-containing protein.
  
 
 0.508
A1O1_02969
Uncharacterized protein.
  
 
  0.498
A1O1_06128
Uncharacterized protein.
 
 
  0.491
A1O1_04089
Uncharacterized protein.
  
 
   0.486
A1O1_08192
Protein mago nashi.
    
  0.472
A1O1_06732
WSC domain-containing protein.
    
  0.465
A1O1_02190
26S proteasome regulatory subunit rpn11.
    
  0.459
A1O1_06008
MRG domain-containing protein.
    
  0.456
Your Current Organism:
Capronia coronata
NCBI taxonomy Id: 1182541
Other names: C. coronata CBS 617.96, Capronia coronata CBS 617.96
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