STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1O3_07737BRCT domain-containing protein. (1743 aa)    
Predicted Functional Partners:
A1O3_08541
DNA polymerase delta subunit 2.
    
 0.615
A1O3_06786
Crossover junction endonuclease MUS81.
    
 0.607
A1O3_09626
Uncharacterized protein.
    
 0.598
A1O3_04852
DNA polymerase.
   
 0.595
A1O3_00910
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.551
A1O3_02409
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.548
A1O3_00666
Histone acetyltransferase type B subunit 2.
    
  0.547
A1O3_05211
Small nuclear ribonucleoprotein Sm D2.
    
  0.532
A1O3_07058
Small nuclear ribonucleoprotein G.
    
  0.527
A1O3_03294
DNA excision repair protein ERCC-4.
    
 0.525
Your Current Organism:
Capronia epimyces
NCBI taxonomy Id: 1182542
Other names: C. epimyces CBS 606.96, Capronia epimyces CBS 606.96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.