STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIZ46224.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
AIZ46225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.611
gabD-2
Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
AIZ46455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
AIZ43899.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
Your Current Organism:
Deinococcus swuensis
NCBI taxonomy Id: 1182571
Other names: D. swuensis, Deinococcus sp. DY59, Deinococcus swuensis Lee et al. 2015, JCM 18581, KCTC 33033, strain DY59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.