STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCSn-glycerol-3-phosphate import ATP-binding protein UgpC 1; Belongs to the ABC transporter superfamily. (381 aa)    
Predicted Functional Partners:
CUX35366.1
ABC transporter, substrate binding protein (Sugar).
 
  0.929
CUX35396.1
ABC transporter transmembrane protein.
 
  0.922
CUX35373.1
ABC transporter, membrane spanning protein.
 
  0.915
aglG
ABC transporter, membrane spanning protein, Alpha-glucoside transport system; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
  0.806
aglF
Alpha-glucoside transport system permease protein AglF.
   
  0.785
aglE
Alpha-glucosides-binding periplasmic protein AglE.
   
  0.758
CUX58760.1
Putative ABC transporter, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
  0.758
CUX42940.1
ABC transporter, substrate binding protein (Sugar).
   
  0.757
CUX42932.1
ABC transporter, membrane spanning protein (Sugar).
  
  0.756
CUX42923.1
ABC transporter, membrane spanning protein.
  
  0.750
Your Current Organism:
Agrobacterium genomosp.
NCBI taxonomy Id: 1183432
Other names: A. genomosp. 3 str. CFBP 6623, Agrobacterium genomosp. 3 str. CFBP 6623
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