STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase. (469 aa)    
Predicted Functional Partners:
GAB95318.1
Hypothetical protein.
 
  
  0.891
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.860
fucA
L-fuculose-phosphate aldolase.
  
 
 0.829
GAB95317.1
Putative aldolase class II protein.
  
 
 0.829
GAB95409.1
Putative 6-phosphogluconate dehydrogenase.
  
 
 0.812
gnd
6-phosphogluconate dehydrogenase; Belongs to the 6-phosphogluconate dehydrogenase family.
    
 0.808
rpiB
Ribose-5-phosphate isomerase B.
    
 0.801
GAB95119.1
Putative zinc-containing alcohol dehydrogenase.
 
 0.800
GAB95076.1
Putative sorbitol dehydrogenase.
 
 0.792
GAB94513.1
Putative mannitol dehydrogenase.
 
  
 0.760
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.