STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB94900.1Putative iron-siderophore ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (386 aa)    
Predicted Functional Partners:
GAB94899.1
Putative iron-siderophore ABC transporter substrate-binding protein.
 
 0.989
GAB94902.1
Putative iron-siderophore ABC transporter ATP-binding protein.
 0.986
GAB94929.1
Putative iron-siderophore ABC transporter ATP-binding protein.
 0.961
GAB94950.1
Putative ABC transporter ATP-binding protein.
 0.961
GAB95622.1
Putative ABC transporter ATP-binding protein.
 0.960
hmuV
Hemin ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 0.957
hmuT
Hemin ABC transporter substrate-binding protein.
 
 
 0.918
GAB94901.1
Putative iron-siderophore ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.894
GAB95619.1
Putative iron-siderophore binding protein.
 
 0.879
GAB94931.1
Putative iron-siderophore ABC transporter substrate-binding protein.
 
 0.859
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
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