STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB95312.1Putative conjugative relaxase. (1178 aa)    
Predicted Functional Partners:
GAB97172.1
Putative ATP-dependent DNA helicase.
  
 
 0.889
GAB97683.1
Putative single-stranded DNA-binding protein.
 
 
 
 0.804
GAB97686.1
Hypothetical protein.
 
   
 0.789
GAB97684.1
Hypothetical protein.
 
   
 0.788
GAB95399.1
Hypothetical protein.
 
   
 0.786
GAB97696.1
Hypothetical protein.
 
  
 0.783
GAB98420.1
Hypothetical protein.
 
     0.779
GAB97701.1
Hypothetical protein.
 
     0.778
GAB97700.1
Hypothetical protein.
  
   
 0.777
GAB97699.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.