STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB96032.1Putative two-component response regulator. (216 aa)    
Predicted Functional Partners:
GAB96033.1
Putative two-component histidine kinase.
 0.989
GAB96722.1
Putative two-component histidine kinase.
 0.953
dctA
C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.506
citXG
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase/2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase.
     
 0.489
citC
Citrate lyase ligase.
     
 0.475
citD
Citrate lyase gamma subunit.
       0.452
citE
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
       0.452
citF
Citrate lyase alpha subunit.
       0.452
GAB98211.1
Hypothetical protein.
 
    0.435
GAB95133.1
Hypothetical protein.
     
 0.413
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.