STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB96408.1Putative two-component response regulator. (216 aa)    
Predicted Functional Partners:
GAB96407.1
Putative two-component histidine kinase.
  0.970
GAB95968.1
Putative two-component histidine kinase.
 
  0.860
GAB96396.1
Putative two-component histidine kinase.
 
  0.859
GAB94231.1
Putative two-component histidine kinase.
 
  0.856
GAB94874.1
Putative two-component histidine kinase.
 0.856
GAB95774.1
Putative two-component histidine kinase.
 
 0.855
GAB94433.1
Putative two-component histidine kinase.
 
  0.844
GAB96524.1
Putative two-component histidine kinase.
 
 0.829
GAB96688.1
Putative two-component histidine kinase.
  
  0.809
GAB94966.1
Putative two-component histidine kinase.
 
  0.806
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.