STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB96652.1Putative transposase. (667 aa)    
Predicted Functional Partners:
GAB96653.1
Hypothetical protein.
     0.964
GAB96651.1
Hypothetical protein.
     0.950
GAB96619.1
Hypothetical protein.
     0.791
GAB96650.1
Hypothetical protein.
       0.786
GAB94445.1
TniB family protein.
 
   
 0.685
GAB96174.1
Hypothetical protein.
  
     0.631
GAB96649.1
Hypothetical protein.
       0.559
GAB94418.1
Hypothetical protein.
  
 
 0.536
GAB96670.1
Hypothetical protein.
  
     0.531
GAB95721.1
Hypothetical protein.
  
     0.529
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.