STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB96706.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
GAB96792.1
Putative dimethylglycine oxidase; Belongs to the GcvT family.
     
 0.743
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.653
GAB94934.1
Putative non-ribosomal peptide synthetase.
    
 0.592
GAB96203.1
Putative non-ribosomal peptide synthetase.
    
 0.566
cydC
ABC transporter permease/ATP-binding protein CydC.
       0.532
cydD
ABC transporter permease/ATP-binding protein CydD.
       0.532
GAB96705.1
Hypothetical protein.
       0.463
GAB96874.1
Putative cytochrome P450.
    
 0.426
GAB94933.1
Putative non-ribosomal peptide synthetase.
    
 0.422
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.