STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdGBranched-chain alpha-keto acid dehydrogenase E1 component beta subunit. (326 aa)    
Predicted Functional Partners:
bkdF
Branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit.
 0.999
bkdA
Branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit.
 0.999
bkdH
Branched-chain alpha-keto acid dehydrogenase E2 component.
 0.998
sucA
2-oxoglutarate dehydrogenase E1 component.
 
 0.998
bkdC
Branched-chain alpha-keto acid dehydrogenase E2 component.
 0.994
GAB95070.1
Putative dihydrolipoamide acyltransferase.
 0.992
lpd
Dihydrolipoamide dehydrogenase.
 0.975
lpd-2
Dihydrolipoamide dehydrogenase.
 0.968
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.945
prs-2
Ribose-phosphate pyrophosphokinase.
   
 0.945
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.