STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB97774.1Putative two-component histidine kinase. (734 aa)    
Predicted Functional Partners:
GAB97777.1
Hypothetical protein.
 0.994
GAB97776.1
Hypothetical protein.
 
     0.939
GAB97775.1
Putative glycosyltransferase.
 
   
 0.906
GAB97401.1
Putative two-component response regulator.
 0.896
cseB
Two-component response regulator CseB.
 0.890
GAB95605.1
Putative two-component response regulator.
 0.888
GAB98203.1
Putative two-component response regulator.
 0.888
regX3
Two-component response regulator RegX3.
 0.887
GAB95975.1
Putative two-component response regulator.
 0.876
GAB95805.1
Putative two-component response regulator.
 0.875
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.