STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB98367.1Putative ferredoxin--NADP(+) reductase. (518 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit.
  
 0.999
GAB96054.1
Hypothetical protein; Belongs to the glutamate synthase family.
  
 0.954
GAB94249.1
Putative pyruvate--ferredoxin oxidoreductase.
  
 
 0.933
GAB96566.1
Hypothetical protein.
    
 0.925
cysH
Adenosine 5'-phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
 
 0.901
GAB97327.1
IMP dehydrogenase family protein.
  
 0.892
GAB97135.1
Putative sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.881
paaK
phenylacetate-CoA oxygenase subunit PaaK.
   
 0.827
GAB95020.1
Putative oxidoreductase.
   
 0.827
metY
O-acetylhomoserine (thiol)-lyase.
   
    0.819
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.