STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB98391.1Putative transposase. (510 aa)    
Predicted Functional Partners:
istB
Transposition helper protein.
 
  
 0.958
GAB98089.1
Putative transposase-associated ATP-binding protein; Belongs to the DnaA family.
 
  
 0.818
GAB98090.1
Putative transposase.
  
     0.756
GAB98336.1
Hypothetical protein.
  
     0.648
GAB94239.1
Putative transposase.
  
     0.505
GAB98337.1
Putative transposase.
 
     0.501
GAB96423.1
Hypothetical protein.
  
     0.491
GAB97555.1
Hypothetical protein.
  
     0.432
GAB94980.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Kineosphaera limosa
NCBI taxonomy Id: 1184609
Other names: K. limosa NBRC 100340, Kineosphaera limosa Lpha5, Kineosphaera limosa NBRC 100340, Kineosphaera limosa str. NBRC 100340, Kineosphaera limosa strain NBRC 100340, [uncultured] High G+C Gram-positive bacterium Lpha5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.