STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthase (Citrulline--aspartate ligase); Belongs to the argininosuccinate synthase family. Type 1 subfamily. (406 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase (ASAL); Arginosuccinase.
 
 0.999
EJN56478.1
Ornithine carbamoyltransferase (OTCase); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.992
EJN56466.1
Glutamate synthase (NADH) large subunit.
  
 
 0.970
carB
Carbamoyl-phosphate synthase pyrimidine-specific large chain; Belongs to the CarB family.
 
 
 0.969
EJN56483.1
Carbamoyl-phosphate synthase pyrimidine-specific large chain.
 
 
 0.967
carA
Carbamoyl-phosphate synthase (Glutamine-hydrolyzing); Belongs to the CarA family.
  
 
 0.957
argC
N-acetyl-gamma-glutamyl-phosphate reductase (AGPR); Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.942
A11Y_74160
Glucose-1-phosphate adenylyltransferase, subunit.
  
 
 0.942
argD
Putative succinylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 0.936
A11Y_74646
Aspartokinase; Belongs to the aspartokinase family.
 
 
 0.932
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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