STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN56507.1Branched-chain amino acid ABC transporter,substrate binding protein. (397 aa)    
Predicted Functional Partners:
A11Y_19256
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
A11Y_14808
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
EJN56504.1
ABC transporter, ATP-binding protein.
 
 
 0.997
A11Y_13998
ABC transporter related protein.
 
 
 0.995
A11Y_11941
ABC-type amino acid transport system, permease and periplasmic component.
   
 0.876
EJN55774.1
ABC transporter, permease protein.
   
 0.876
EJN56209.1
Glutamine-binding protein / Glutamine transport system permease protein.
   
 0.876
A11Y_19255
Acetoin utilization Putative/CBS domain protein.
 
     0.799
EJN55520.1
Amino acid transport protein.
     
 0.795
EJN56706.1
Putative branched-chain amino acid permease (Azaleucine resistance).
     
 0.795
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.