STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A11Y_13300ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component. (238 aa)    
Predicted Functional Partners:
A11Y_8380
ABC-type aliphatic sulfonate transport system, ATP-binding component.
 
 0.983
EJN55580.1
Acyltransferase.
 
     0.798
A11Y_13298
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
    0.760
EJN56466.1
Glutamate synthase (NADH) large subunit.
   
  
 0.604
A11Y_22737
NADPH-dependent FMN reductase domain protein.
  
 
  0.593
EJN56504.1
ABC transporter, ATP-binding protein.
    
  0.585
EJN55230.1
Nitrate reductase, alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.564
EJN56817.1
Fumarate reductase, flavoprotein subunit.
  
 
  0.541
A11Y_2053
Putative FMN reductase.
  
 
  0.539
EJN56301.1
Conserved protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family.
  
 
  0.530
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.