STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN56750.1Isochorismatase family protein. (207 aa)    
Predicted Functional Partners:
EJN56751.1
Hypothetical protein.
 
     0.870
EJN53830.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.522
A11Y_30078
Hypothetical protein.
       0.503
EJN55633.1
Hypothetical protein.
  
     0.482
birA
Biotin operon repressor / biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.470
A11Y_63183
Menaquinone-specific isochorismate synthase.
     
 0.459
EJN56282.1
Putative para-aminobenzoate synthase, component 1.
     
 0.457
A11Y_37994
Acyltransferase 3.
 
    0.451
EJN54249.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.450
A11Y_64461
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.450
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.