STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN56411.1Hypothetical protein; Belongs to the TelA family. (395 aa)    
Predicted Functional Partners:
EJN56412.1
Hypothetical protein.
 
  
 0.987
EJN55616.1
YvlB like protein.
  
    0.732
EJN55122.1
Putative membrane protein.
  
   
 0.677
EJN55985.1
Hypothetical protein.
  
    0.564
A11Y_81597
Hydrolase, NUDIX family.
  
    0.537
EJN55123.1
Histidine kinase family protein.
  
    0.451
EJN55745.1
Transcription regulator.
    
   0.432
EJN53207.1
Galactose operon repressor.
    
   0.432
EJN55492.1
CcpA transcriptional regulator (Catabolic control protein A).
    
   0.432
A11Y_72307
Sucrose operon repressor ScrR.
    
   0.432
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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