STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN56309.1ABC transporter, permease protein. (219 aa)    
Predicted Functional Partners:
A11Y_14669
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.995
A11Y_14086
ABC transporter protein.
 0.988
EJN56310.1
ABC transporter, permease protein.
 
  
 
0.987
EJN55775.1
Glutamine ABC transporter ATP-binding component.
 0.970
EJN56208.1
ABC transporter family protein.
 0.964
EJN56625.1
Amino acid ABC transporter, ATP-binding protein.
 0.956
EJN55556.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.952
EJN55555.1
ABC-type transporter, periplasmic subunit family 3.
 0.923
EJN55762.1
Polar-amino-acid-transporting ATPase.
 0.879
A11Y_55454
Glutamine ABC superfamily ATP binding cassette transporter, ABC protein.
 0.840
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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