STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN55270.1Lactate racemization operon protein LarC; N-terminal domain. (262 aa)    
Predicted Functional Partners:
EJN55268.1
Hypothetical protein.
 
 0.998
A11Y_72233
Phosphoribosylaminoimidazole carboxylase catalytic subunit.
 
  
 0.987
EJN55272.1
Hypothetical protein.
 
  
 0.969
A11Y_72232
Crp/Fnr family transcriptional regulator.
 
  
 0.883
EJN55275.1
Cobalt transporter.
  
    0.655
A11Y_72231
ABC superfamily ATP binding cassette transporter, membrane protein.
  
    0.610
cbiM
Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
    0.528
Your Current Organism:
Lactobacillus coryniformis
NCBI taxonomy Id: 1185325
Other names: L. coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis CECT 5711, Lactobacillus coryniformis subsp. coryniformis str. CECT 5711, Lactobacillus coryniformis subsp. coryniformis strain CECT 5711
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.